James C Schnable: search on Z-Library

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1

NU-Spidercam: A large-scale, cable-driven, integrated sensing and robotic system for advanced phenotyping, remote sensing, and agronomic research

Bai, Geng, Ge, Yufeng, Scoby, David, Leavitt, Bryan, Stoerger, Vincent, Kirchgessner, Norbert, Irmak, Suat, Graef, George, Schnable, James, Awada, Tala

Journal:

Computers and Electronics in Agriculture

Year:

2019

Language:

english

File:

PDF, 5.62 MB

english, 2019

2

In vivo human-like robotic phenotyping of leaf traits in maize and sorghum in greenhouse

Atefi, Abbas, Ge, Yufeng, Pitla, Santosh, Schnable, James

Journal:

Computers and Electronics in Agriculture

Year:

2019

Language:

english

File:

PDF, 2.53 MB

english, 2019

3

Temporal dynamics of maize plant growth, water use, and leaf water content using automated high throughput RGB and hyperspectral imaging

Ge, Yufeng, Bai, Geng, Stoerger, Vincent, Schnable, James C.

Journal:

Computers and Electronics in Agriculture

Year:

2016

Language:

english

File:

PDF, 1.29 MB

english, 2016

4

Genome Evolution in Maize: From Genomes Back to Genes

Schnable, James C.

Journal:

Annual Review of Plant Biology

Year:

2015

Language:

english

File:

PDF, 934 KB

english, 2015

5

Fractionation mutagenesis and similar consequences of mechanisms removing dispensable or less-expressed DNA in plants

Michael Freeling, Margaret R Woodhouse, Shabarinath Subramaniam, Gina Turco, Damon Lisch, James C Schnable

Journal:

Current Opinion in Plant Biology

Year:

2012

Language:

english

File:

PDF, 1.24 MB

english, 2012

6

In vivo human-like robotic phenotyping of leaf traits in maize and sorghum in greenhouse

Atefi, Abbas, Ge, Yufeng, Pitla, Santosh, Schnable, James

Journal:

Computers and Electronics in Agriculture

Year:

2019

File:

PDF, 2.53 MB

2019

7

A Comprehensive Analysis of Alternative Splicing in Paleopolyploid Maize

Mei, Wenbin, Liu, Sanzhen, Schnable, James C., Yeh, Cheng-Ting, Springer, Nathan M., Schnable, Patrick S., Barbazuk, William B.

Journal:

Frontiers in Plant Science

Year:

2017

Language:

english

File:

PDF, 4.77 MB

english, 2017

8

Automated conserved non-coding sequence (CNS) discovery reveals differences in gene content and promoter evolution among grasses

Turco, Gina, Schnable, James C., Pedersen, Brent, Freeling, Michael

Journal:

Frontiers in Plant Science

Year:

2013

Language:

english

File:

PDF, 2.25 MB

english, 2013

9

Identification of Loci Controlling Adaptation in Chinese Soybean Landraces via a Combination of Conventional and Bioclimatic GWAS

Li, Ying-hui, Li, Delin, Jiao, Yong-qing, Schnable, James C., Li, Yan-fei, Li, Hui-hui, Chen, Huai-zhu, Hong, Hui-long, Zhang, Ting, Liu, Bin, Liu, Zhang-xiong, You, Qing-bo, Tian, Yu, Guo, Yong, Guan

Journal:

Plant Biotechnology Journal

Year:

2019

Language:

english

File:

PDF, 1.15 MB

english, 2019

10

Dose–Sensitivity, Conserved Non-Coding Sequences, and Duplicate Gene Retention Through Multiple Tetraploidies in the Grasses

Schnable, James C., Pedersen, Brent S., Subramaniam, Sabarinath, Freeling, Michael

Journal:

Frontiers in Plant Science

Year:

2011

Language:

english

File:

PDF, 1.33 MB

english, 2011

11

High-throughput analysis of leaf physiological and chemical traits with VIS–NIR–SWIR spectroscopy: a case study with a maize diversity panel

Ge, Yufeng, Atefi, Abbas, Zhang, Huichun, Miao, Chenyong, Ramamurthy, Raghuprakash Kastoori, Sigmon, Brandi, Yang, Jinliang, Schnable, James C.

Journal:

Year:

2019

File:

PDF, 2.16 MB

2019

12

Identification of Loci Controlling Adaptation in Chinese Soybean Landraces via a Combination of Conventional and Bioclimatic GWAS

Li, Ying-hui, Li, Delin, Jiao, Yong-qing, Schnable, James C., Li, Yan-fei, Li, Hui-hui, Chen, Huai-zhu, Hong, Hui-long, Zhang, Ting, Liu, Bin, Liu, Zhang-xiong, You, Qing-bo, Tian, Yu, Guo, Yong, Guan

Journal:

Plant Biotechnology Journal

Year:

2019

File:

PDF, 1.15 MB

2019

13

Advances in plant phenomics: From data and algorithms to biological insights

Kenchanmane Raju, Sunil K., Thompson, Addie M., Schnable, James C.

Journal:

Applications in Plant Sciences

Year:

2020

File:

PDF, 243 KB

2020

14

High Throughput In vivo Analysis of Plant Leaf Chemical Properties Using Hyperspectral Imaging

Pandey, Piyush, Ge, Yufeng, Stoerger, Vincent, Schnable, James C.

Journal:

Frontiers in Plant Science

Year:

2017

Language:

english

File:

PDF, 2.12 MB

english, 2017

15

Optimizing the identification of causal variants across varying genetic architectures in crops

Miao, Chenyong, Yang, Jinliang, Schnable, James C.

Journal:

Plant Biotechnology Journal

Year:

2018

Language:

english

File:

PDF, 928 KB

english, 2018

16

Cross species selection scans identify components of C 4 photosynthesis in the grasses

Huang, Pu, Studer, Anthony J., Schnable, James C., Kellogg, Elizabeth A., Brutnell, Thomas P.

Journal:

Journal of Experimental Botany

Year:

2017

Language:

english

File:

PDF, 8.63 MB

english, 2017

17

Evolutionarily Conserved Alternative Splicing Across Monocots

Mei, Wenbin, Boatwright, Lucas, Feng, Guanqiao, Schnable, James C., Barbazuk, W. Brad

Journal:

Year:

2017

Language:

english

File:

PDF, 9.47 MB

english, 2017

18

tGBS® genotyping-by-sequencing enables reliable genotyping of heterozygous loci

Ott, Alina, Liu, Sanzhen, Schnable, James C., Yeh, Cheng-Ting ‘Eddy’, Wang, Kai-Sin, Schnable, Patrick S.

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 1.88 MB

english, 2017

19

Linked read technology for assembling large complex and polyploid genomes

Ott, Alina, Schnable, James C., Yeh, Cheng-Ting, Wu, Linjiang, Liu, Chao, Hu, Heng-Cheng, Dalgard, Clifton L., Sarkar, Soumik, Schnable, Patrick S.

Journal:

Year:

2018

Language:

english

File:

PDF, 1.31 MB

english, 2018

20

QTL identification and epistatic effect analysis of seed size- and weight-related traits in Zea mays L

Li, Li, Li, Xuhui, Li, Lulu, Schnable, James, Gu, Riliang, Wang, Jianhua

Journal:

Molecular Breeding

Year:

2019

File:

PDF, 4.72 MB

2019

21

Impacts of Whole-Genome Triplication on MIRNA Evolution in Brassica rapa

Sun, Chao, Wu, Jian, Liang, Jianli, Schnable, James C., Yang, Wencai, Cheng, Feng, Wang, Xiaowu

Journal:

Genome Biology and Evolution

Year:

2015

Language:

english

File:

PDF, 1.32 MB

english, 2015

22

Functional Modeling of Plant Growth Dynamics

Xu, Yuhang, Qiu, Yumou, Schnable, James C.

Journal:

Year:

2018

Language:

english

File:

PDF, 1.79 MB

english, 2018

23

[IEEE 2019 20th International Conference on Solid-State Sensors, Actuators and Microsystems & Eurosensors XXXIII (TRANSDUCERS & EUROSENSORS XXXIII) - Berlin, Germany (2019.6.23-2019.6.27)] 2019 20th International Conference on Solid-State Sensors, Actuators and Microsystems & Eurosensors XXXIII (TRANSDUCERS & EUROSENSORS XXXIII) - In-Planta Nitrate Detection Using Insertable Plant Microsensor

Jiao, Yueyi, Wang, Xinran, Chen, Yuncong, Castellano, Michael J., Schnable, James C., Schnable, Patrick S., Dong, Liang

Year:

2019

File:

PDF, 1.33 MB

2019

24

Continuous Monitoring of Soil Nitrate Using a Miniature Sensor with Poly(3-octyl-thiophene) and Molybdenum Disulfide Nanocomposite

Ali, Md. Azahar, Wang, Xinran, Chen, Yuncong, Jiao, Yueyi, Mahal, Navreet K, Moru, Satyanarayana, Castellano, Michael J, Schnable, James C, Schnable, Patrick, Dong, Liang

Journal:

ACS Applied Materials & Interfaces

Year:

2019

Language:

english

File:

PDF, 880 KB

english, 2019

25

A near complete snapshot of the Zea mays seedling transcriptome revealed from ultra-deep sequencing

Martin, Jeffrey A., Johnson, Nicole V., Gross, Stephen M., Schnable, James, Meng, Xiandong, Wang, Mei, Coleman-Derr, Devin, Lindquist, Erika, Wei, Chia-Lin, Kaeppler, Shawn, Chen, Feng, Wang, Zhong

Journal:

Scientific Reports

Year:

2014

Language:

english

File:

PDF, 1.03 MB

english, 2014

26

Genome-wide characterization of non-reference transposable element insertion polymorphisms reveals genetic diversity in tropical and temperate maize

Lai, Xianjun, Schnable, James C., Liao, Zhengqiao, Xu, Jie, Zhang, Gengyun, Li, Chuan, Hu, Erliang, Rong, Tingzhao, Xu, Yunbi, Lu, Yanli

Journal:

Year:

2017

Language:

english

File:

PDF, 2.00 MB

english, 2017

27

Continuous Monitoring of Soil Nitrate Using a Miniature Sensor with Poly(3-octyl-thiophene) and Molybdenum Disulfide Nanocomposite

Ali, Md. Azahar, Wang, Xinran, Chen, Yuncong, Jiao, Yueyi, Mahal, Navreet K, Moru, Satyanarayana, Castellano, Michael J, Schnable, James C, Schnable, Patrick, Dong, Liang

Journal:

ACS Applied Materials & Interfaces

Year:

2019

File:

PDF, 880 KB

2019

28

Screening synteny blocks in pairwise genome comparisons through integer programming

Haibao Tang, Eric Lyons, Brent Pedersen, James C Schnable, Andrew H Paterson, Michael Freeling

Journal:

BMC Bioinformatics

Year:

2011

Language:

english

File:

PDF, 1.72 MB

english, 2011

29

The C-terminal motif of SiAGO1b is required for the regulation of growth, development and stress responses in foxtail millet ( Setaria italica (L.) P. Beauv)

Liu, Xiaotong, Tang, Sha, Jia, Guanqing, Schnable, James C., Su, Haixia, Tang, Chanjuan, Zhi, Hui, Diao, Xianmin

Journal:

Journal of Experimental Botany

Year:

2016

Language:

english

File:

PDF, 2.07 MB

english, 2016

30

Multiscale computational models can guide experimentation and targeted measurements for crop improvement

Benes, Bedrich, Guan, Kaiyu, Lang, Meagan, Long, Stephen P., Lynch, Jonathan P., MarshallâColÃ³n, Amy, Peng, Bin, Schnable, James, Sweetlove, Lee, Turk, Matthew

Journal:

The Plant Journal

Year:

2020

File:

PDF, 854 KB

2020

31

Plant segmentation by supervised machine learning methods

Adams, Jason, Qiu, Yumou, Xu, Yuhang, Schnable, James C.

Journal:

Year:

2020

File:

PDF, 2.04 MB

2020

32

Mapping QTLs for morpho-agronomic traits in proso millet (Panicum miliaceumL.)

Rajput, Santosh G., Santra, Dipak K., Schnable, James

Journal:

Molecular Breeding

Year:

2016

Language:

english

File:

PDF, 940 KB

english, 2016

33

Enhancing Hybrid Prediction in Pearl Millet Using Genomic and/or Multi-Environment Phenotypic Information of Inbreds

Jarquin, Diego, Howard, Reka, Liang, Zhikai, Gupta, Shashi K., Schnable, James C., Crossa, Jose

Journal:

Frontiers in Genetics

Year:

2020

File:

PDF, 1.40 MB

2020

34

Kinetic variation in grass phospho enol pyruvate carboxylases provides opportunity to enhance C 4 photosynthetic efficiency

DiMario, Robert J., Kophs, Ashley N., Pathare, Varsha S., Schnable, James C., Cousins, Asaph B.

Journal:

The Plant Journal

Year:

2020

File:

PDF, 18.99 MB

2020

35

Following Tetraploidy in Maize, a Short Deletion Mechanism Removed Genes Preferentially from One of the Two Homeologs

Woodhouse, Margaret R., Schnable, James C., Pedersen, Brent S., Lyons, Eric, Lisch, Damon, Subramaniam, Shabarinath, Freeling, Michael, Wolfe, Kenneth H.

Journal:

Year:

2010

Language:

english

File:

PDF, 724 KB

english, 2010

36

The draft genome of the C3panicoid grass speciesDichanthelium oligosanthes

Studer, Anthony J., Schnable, James C., Weissmann, Sarit, Kolbe, Allison R., McKain, Michael R., Shao, Ying, Cousins, Asaph B., Kellogg, Elizabeth A., Brutnell, Thomas P.

Journal:

Year:

2016

Language:

english

File:

PDF, 3.17 MB

english, 2016

37

Differentially Regulated Orthologs in Sorghum and the Subgenomes of Maize

Zhang, Yang, Ngu, Daniel W., Carvalho, Daniel, Liang, Zhikai, Qiu, Yumou, Roston, Rebecca, Schnable, James

Journal:

Year:

2017

Language:

english

File:

PDF, 11.07 MB

english, 2017

38

Serum bile acid patterns are associated with the presence of NAFLD in twins, and dose-dependent changes with increase in fibrosis stage in patients with biopsy-proven NAFLD

Caussy, Cyrielle, Hsu, Cynthia, Singh, Seema, Bassirian, Shirin, Kolar, James, Faulkner, Claire, Sinha, Nikhil, Bettencourt, Ricki, Gara, Naveen, Valasek, Mark A., Schnabl, Bernd, Richards, Lisa, Bren

Journal:

Alimentary Pharmacology & Therapeutics

Year:

2018

Language:

english

File:

PDF, 845 KB

english, 2018

39

Genes and Gene Models, An Important Distinction

Schnable, James C.

Journal:

New Phytologist

Year:

2019

Language:

english

File:

PDF, 243 KB

english, 2019

40

Genome-wide Characterization of DNase I-hypersensitive Sites and Cold Response Regulatory Landscapes in Grasses

Han, Jinlei, Wang, Pengxi, Wang, Qiongli, Lin, Qingfang, Chen, Zhiyong, Yu, Guangrun, Miao, Chenyong, Dao, Yihang, Wu, Ruoxi, Schnable, James, Tang, Haibao, Wang, Kai

Journal:

Year:

2020

File:

PDF, 5.04 MB

2020

41

Author Correction: Genome-Guided Phylo-Transcriptomic Methods and the Nuclear Phylogenetic Tree of the Paniceae Grasses

Washburn, Jacob D., Schnable, James C., Conant, Gavin C., Brutnell, Thomas P., Shao, Ying, Zhang, Yang, Ludwig, Martha, Davidse, Gerrit, Pires, J. Chris

Journal:

Scientific Reports

Year:

2018

Language:

english

File:

PDF, 659 KB

english, 2018

42

Increased power and accuracy of causal locus identification in time-series genome-wide association in sorghum

Miao, Chenyong, Xu, Yuhang, Liu, Sanzhen, Schnable, Patrick S., Schnable, James

Journal:

PLANT PHYSIOLOGY

Year:

2020

File:

PDF, 4.58 MB

2020

43

Nonâhomologyâbased prediction of gene functions in maize ( Zea mays ssp. mays )

Dai, Xiuru, Xu, Zheng, Liang, Zhikai, Tu, Xiaoyu, Zhong, Silin, Schnable, James C., Li, Pinghua

Journal:

The Plant Genome

Year:

2020

File:

PDF, 2.31 MB

2020

44

RGPDB: database of root-associated genes and promoters in maize, soybean, and sorghum

Moisseyev, Gleb, Park, Kiyoul, Cui, Alix, Freitas, Daniel, Rajagopal, Divith, Konda, Anji Reddy, Martin-Olenski, Madalayne, Mcham, Mackenzie, Liu, Kan, Du, Qian, Schnable, James C, Moriyama, Etsuko N,

Journal:

Year:

2020

File:

PDF, 932 KB

2020

45

Robotic Detection and Grasp of Maize and Sorghum: Stem Measurement with Contact

Atefi, Abbas, Ge, Yufeng, Pitla, Santosh, Schnable, James

Journal:

Year:

2020

File:

PDF, 3.65 MB

2020

46

ALLMAPS: robust scaffold ordering based on multiple maps

Tang, Haibao, Zhang, Xingtan, Miao, Chenyong, Zhang, Jisen, Ming, Ray, Schnable, James C, Schnable, Patrick S, Lyons, Eric, Lu, Jianguo

Journal:

Year:

2015

Language:

english

File:

PDF, 2.58 MB

english, 2015

47

Location of low copy genes in chromosomes of Brachiaria spp.

Nani, Thaís Furtado, Schnable, James C., Washburn, Jacob D., Albert, Patrice, Pereira, Welison Andrade, Sobrinho, Fausto Souza, Birchler, James A., Techio, Vânia Helena

Journal:

Molecular Biology Reports

Year:

2018

Language:

english

File:

PDF, 1.27 MB

english, 2018

48

Association of DHODH haplotype variants and response to leflunomide treatment in rheumatoid arthritis

O’Doherty, Catherine, Schnabl, Matthew, Spargo, Llewellyn, Cleland, Leslie G, James, Michael, Proudman, Susanna M, Wiese, Michael D

Journal:

Pharmacogenomics

Year:

2012

Language:

english

File:

PDF, 709 KB

english, 2012

49

Shared Genetic Control of Root System Architecture between Zea mays and Sorghum bicolor

Zheng, Zihao, Hey, Stefan, Jubery, Talukder, Liu, Huyu, Yang, Yu, Coffey, Lisa, Miao, Chenyong, Sigmon, Brandi, Schnable, James C., Hochholdinger, Frank, Ganapathysubramanian, Baskar, Schnable, Patric

Journal:

PLANT PHYSIOLOGY

Year:

2020

Language:

english

File:

PDF, 2.01 MB

english, 2020

50

[IEEE 2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - Kansas City, MO (2017.11.13-2017.11.16)] 2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - DiCE: Discovery of conserved noncoding sequences efficiently

Behera, Sairam, Li, Xianjun, Schnable, James, Deogun, Jitender S.

Year:

2017

Language:

english

File:

PDF, 664 KB

english, 2017

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